Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 MIR940-201ENST00000401276 94 ntBASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 AL161645.1-201ENST00000622716 1255 ntBASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 MIR574-201ENST00000385209 96 ntBASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 AC002056.1-201ENST00000395613 760 ntBASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 AL589702.1-201ENST00000641229 1509 ntBASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 AC008677.1-201ENST00000519230 1561 ntBASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF549Q6P9A3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF549Q6P9A3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms