Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 C20orf181-201ENST00000623918 480 ntBASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 AC092902.6-201ENST00000641783 218 ntBASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 MTHFR-217ENST00000641820 1569 ntBASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 AL031055.1-201ENST00000606362 631 ntBASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 AC099522.2-201ENST00000607001 744 ntBASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 AC055717.3-201ENST00000622967 595 ntBASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KHDC1Q4VXA5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 TNRC18P2-201ENST00000417666 2714 ntBASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 HTR5BP-201ENST00000430851 1154 ntBASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 DNAJB3-201ENST00000446806 729 ntBASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 AL009183.1-201ENST00000603760 355 ntBASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 AP001350.2-201ENST00000625104 1094 ntBASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms