Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 HLA-A-202ENST00000376806 1854 ntBASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 AC078925.2-201ENST00000624013 1973 ntBASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 AC234783.1-201ENST00000441761 496 ntBASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 AC104596.2-201ENST00000512793 793 ntBASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 AP005482.1-201ENST00000563722 1273 ntBASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 BTNL10-201ENST00000595971 695 ntBASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM71Q2Q1W2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 OR6D1P-202ENST00000641007 5290 ntBASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 KRT223P-202ENST00000449164 1292 ntBASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 RNF216P1-203ENST00000404404 2427 ntBASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
TRIM71Q2Q1W2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms