Protein–RNA interactions for Protein: Q15042

RAB3GAP1, Rab3 GTPase-activating protein catalytic subunit, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1Q15042 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 AC009093.7-201ENST00000623853 1223 ntBASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RAB3GAP1Q15042 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3GAP1Q15042 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 AKAP8P1-201ENST00000434743 1349 ntBASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 HCG4-201ENST00000418983 998 ntBASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 DBET-201ENST00000630918 3363 ntBASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 GGT3P-204ENST00000453783 1664 ntBASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3GAP1Q15042 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB3GAP1Q15042 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms