Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC9.84□□□□□ -0.83
HSPG2P98160 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC9.84□□□□□ -0.83
HSPG2P98160 CYP51A1P3-201ENST00000400072 1428 ntBASIC9.84□□□□□ -0.83
HSPG2P98160 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC9.84□□□□□ -0.83
HSPG2P98160 AC090164.3-201ENST00000610780 2143 ntBASIC9.84□□□□□ -0.83
HSPG2P98160 CD276-201ENST00000318424 2738 ntTSL 5 BASIC9.84□□□□□ -0.83
HSPG2P98160 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 GAPDHP40-201ENST00000505218 1006 ntBASIC9.84□□□□□ -0.83
HSPG2P98160 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC9.84□□□□□ -0.83
HSPG2P98160 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
HSPG2P98160 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC9.84□□□□□ -0.83
HSPG2P98160 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC9.84□□□□□ -0.83
HSPG2P98160 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC9.84□□□□□ -0.83
HSPG2P98160 AC027139.1-201ENST00000565286 951 ntBASIC9.84□□□□□ -0.83
HSPG2P98160 TP73-209ENST00000603362 1668 ntTSL 5 BASIC9.84□□□□□ -0.83
HSPG2P98160 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
HSPG2P98160 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
HSPG2P98160 U82695.1-201ENST00000635752 1889 ntBASIC9.84□□□□□ -0.83
HSPG2P98160 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC9.84□□□□□ -0.83
HSPG2P98160 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC9.84□□□□□ -0.83
HSPG2P98160 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
HSPG2P98160 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
HSPG2P98160 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC9.84□□□□□ -0.83
HSPG2P98160 FGFR3P1-201ENST00000449999 601 ntBASIC9.84□□□□□ -0.83
HSPG2P98160 AC234782.1-201ENST00000451950 919 ntBASIC9.84□□□□□ -0.83
HSPG2P98160 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC9.84□□□□□ -0.83
HSPG2P98160 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC9.84□□□□□ -0.83
HSPG2P98160 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC9.83□□□□□ -0.84
HSPG2P98160 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC9.83□□□□□ -0.84
HSPG2P98160 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 AC009053.2-201ENST00000563701 2365 ntBASIC9.83□□□□□ -0.84
HSPG2P98160 MIR1202-201ENST00000408529 83 ntBASIC9.83□□□□□ -0.84
HSPG2P98160 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC9.83□□□□□ -0.84
HSPG2P98160 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC9.83□□□□□ -0.84
HSPG2P98160 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC9.83□□□□□ -0.84
HSPG2P98160 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC9.83□□□□□ -0.84
HSPG2P98160 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC9.83□□□□□ -0.84
HSPG2P98160 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
HSPG2P98160 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC9.83□□□□□ -0.84
HSPG2P98160 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 IGLV3-15-201ENST00000518356 244 ntBASIC9.83□□□□□ -0.84
HSPG2P98160 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC9.83□□□□□ -0.84
HSPG2P98160 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 PPY2P-201ENST00000582808 702 ntBASIC9.83□□□□□ -0.84
HSPG2P98160 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 AL121723.1-201ENST00000445194 1519 ntBASIC9.83□□□□□ -0.84
HSPG2P98160 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
HSPG2P98160 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
HSPG2P98160 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
HSPG2P98160 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC9.83□□□□□ -0.84
HSPG2P98160 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 AP003171.2-201ENST00000528208 925 ntBASIC9.83□□□□□ -0.84
HSPG2P98160 NAT9-222ENST00000583476 583 ntTSL 3 BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms