Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 AC106881.1-201ENST00000605849 3329 ntBASIC14.9□□□□□ -0.02
CXCR4P61073 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 AC131009.4-201ENST00000624048 1740 ntBASIC14.9□□□□□ -0.02
CXCR4P61073 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CXCR4P61073 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCR4P61073 NUS1P2-201ENST00000417358 873 ntBASIC14.9□□□□□ -0.02
CXCR4P61073 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.9□□□□□ -0.02
CXCR4P61073 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCR4P61073 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCR4P61073 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.9□□□□□ -0.02
CXCR4P61073 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.9□□□□□ -0.02
CXCR4P61073 AC099336.1-202ENST00000602961 463 ntBASIC14.9□□□□□ -0.02
CXCR4P61073 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.9□□□□□ -0.02
CXCR4P61073 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CXCR4P61073 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.9□□□□□ -0.02
CXCR4P61073 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCR4P61073 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CXCR4P61073 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 CICP23-201ENST00000605013 2741 ntBASIC14.9□□□□□ -0.02
CXCR4P61073 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCR4P61073 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCR4P61073 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CXCR4P61073 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCR4P61073 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CXCR4P61073 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCR4P61073 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CXCR4P61073 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.89□□□□□ -0.03
CXCR4P61073 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.89□□□□□ -0.03
CXCR4P61073 KRT18P21-201ENST00000515767 1272 ntBASIC14.89□□□□□ -0.03
CXCR4P61073 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCR4P61073 AC012615.1-201ENST00000565797 1299 ntBASIC14.89□□□□□ -0.03
CXCR4P61073 MIR5100-201ENST00000579544 119 ntBASIC14.89□□□□□ -0.03
CXCR4P61073 AL353135.1-201ENST00000606729 504 ntBASIC14.89□□□□□ -0.03
CXCR4P61073 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.89□□□□□ -0.03
CXCR4P61073 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.89□□□□□ -0.03
CXCR4P61073 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCR4P61073 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCR4P61073 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCR4P61073 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CXCR4P61073 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CXCR4P61073 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCR4P61073 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CXCR4P61073 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCR4P61073 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.89□□□□□ -0.03
CXCR4P61073 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CXCR4P61073 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCR4P61073 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCR4P61073 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CXCR4P61073 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.88□□□□□ -0.03
CXCR4P61073 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.88□□□□□ -0.03
CXCR4P61073 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.88□□□□□ -0.03
CXCR4P61073 MIR3180-1-201ENST00000580374 94 ntBASIC14.88□□□□□ -0.03
CXCR4P61073 MIR3180-3-201ENST00000584616 94 ntBASIC14.88□□□□□ -0.03
CXCR4P61073 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.88□□□□□ -0.03
CXCR4P61073 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 SNX18-202ENST00000343017 3140 ntBASIC14.88□□□□□ -0.03
CXCR4P61073 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.88□□□□□ -0.03
CXCR4P61073 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCR4P61073 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.88□□□□□ -0.03
CXCR4P61073 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms