Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RAB5BP61020 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5BP61020 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5BP61020 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5BP61020 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
RAB5BP61020 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5BP61020 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5BP61020 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5BP61020 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5BP61020 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB5BP61020 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
RAB5BP61020 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB5BP61020 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
RAB5BP61020 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5BP61020 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5BP61020 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.78□□□□□ -0.36
RAB5BP61020 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
RAB5BP61020 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.77□□□□□ -0.36
RAB5BP61020 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RAB5BP61020 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB5BP61020 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
RAB5BP61020 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.77□□□□□ -0.36
RAB5BP61020 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB5BP61020 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.77□□□□□ -0.36
RAB5BP61020 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
RAB5BP61020 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.77□□□□□ -0.36
RAB5BP61020 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
RAB5BP61020 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
RAB5BP61020 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RAB5BP61020 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5BP61020 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB5BP61020 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.77□□□□□ -0.37
RAB5BP61020 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 AC016769.1-201ENST00000409132 1010 ntBASIC12.77□□□□□ -0.37
RAB5BP61020 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RAB5BP61020 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB5BP61020 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
RAB5BP61020 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC12.77□□□□□ -0.37
RAB5BP61020 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.77□□□□□ -0.37
RAB5BP61020 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB5BP61020 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RAB5BP61020 AC120498.8-201ENST00000614275 531 ntBASIC12.77□□□□□ -0.37
RAB5BP61020 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RAB5BP61020 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 AGAP7P-201ENST00000582299 2062 ntBASIC12.77□□□□□ -0.37
RAB5BP61020 AGAP14-201ENST00000624701 2060 ntBASIC12.77□□□□□ -0.37
RAB5BP61020 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB5BP61020 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB5BP61020 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
RAB5BP61020 EGFEM1P-202ENST00000431685 1563 ntBASIC12.77□□□□□ -0.37
RAB5BP61020 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
RAB5BP61020 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
RAB5BP61020 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5BP61020 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 AC069224.1-201ENST00000566372 1715 ntBASIC12.76□□□□□ -0.37
RAB5BP61020 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB5BP61020 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB5BP61020 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RAB5BP61020 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB5BP61020 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
RAB5BP61020 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms