Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.47■□□□□ 0.23
WNT3AP56704 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
WNT3AP56704 MIR3687-1-201ENST00000614492 61 ntBASIC16.47■□□□□ 0.23
WNT3AP56704 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
WNT3AP56704 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.47■□□□□ 0.23
WNT3AP56704 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
WNT3AP56704 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.47■□□□□ 0.23
WNT3AP56704 AC010491.1-201ENST00000563101 2797 ntBASIC16.47■□□□□ 0.23
WNT3AP56704 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
WNT3AP56704 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.47■□□□□ 0.23
WNT3AP56704 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
WNT3AP56704 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.46■□□□□ 0.23
WNT3AP56704 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.46■□□□□ 0.23
WNT3AP56704 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.46■□□□□ 0.23
WNT3AP56704 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
WNT3AP56704 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.46■□□□□ 0.23
WNT3AP56704 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
WNT3AP56704 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
WNT3AP56704 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
WNT3AP56704 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
WNT3AP56704 MIR346-201ENST00000362234 95 ntBASIC16.46■□□□□ 0.23
WNT3AP56704 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 RPSAP43-201ENST00000402237 625 ntBASIC16.46■□□□□ 0.23
WNT3AP56704 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.46■□□□□ 0.23
WNT3AP56704 UPF3AP3-201ENST00000420996 769 ntBASIC16.46■□□□□ 0.23
WNT3AP56704 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.46■□□□□ 0.23
WNT3AP56704 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.46■□□□□ 0.23
WNT3AP56704 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.46■□□□□ 0.23
WNT3AP56704 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.46■□□□□ 0.23
WNT3AP56704 IGHV3-62-201ENST00000520057 340 ntBASIC16.46■□□□□ 0.23
WNT3AP56704 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.46■□□□□ 0.23
WNT3AP56704 AP000842.3-202ENST00000569238 1080 ntBASIC16.46■□□□□ 0.23
WNT3AP56704 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.46■□□□□ 0.23
WNT3AP56704 AC105339.1-204ENST00000636249 355 ntBASIC16.46■□□□□ 0.23
WNT3AP56704 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.46■□□□□ 0.23
WNT3AP56704 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
WNT3AP56704 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
WNT3AP56704 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 AC008894.3-201ENST00000624324 3103 ntBASIC16.46■□□□□ 0.23
WNT3AP56704 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
WNT3AP56704 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
WNT3AP56704 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
WNT3AP56704 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
WNT3AP56704 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
WNT3AP56704 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
WNT3AP56704 AL365203.3-201ENST00000609742 2057 ntBASIC16.46■□□□□ 0.22
WNT3AP56704 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
WNT3AP56704 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.45■□□□□ 0.22
WNT3AP56704 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
WNT3AP56704 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
WNT3AP56704 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.45■□□□□ 0.22
WNT3AP56704 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.45■□□□□ 0.22
WNT3AP56704 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.45■□□□□ 0.22
WNT3AP56704 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
WNT3AP56704 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 AL592309.1-201ENST00000443127 649 ntBASIC16.45■□□□□ 0.22
WNT3AP56704 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 AC069335.1-201ENST00000489972 472 ntBASIC16.45■□□□□ 0.22
WNT3AP56704 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.45■□□□□ 0.22
WNT3AP56704 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.45■□□□□ 0.22
WNT3AP56704 KRT8P23-201ENST00000560090 1207 ntBASIC16.45■□□□□ 0.22
WNT3AP56704 MIR4321-201ENST00000592276 80 ntBASIC16.45■□□□□ 0.22
WNT3AP56704 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.45■□□□□ 0.22
WNT3AP56704 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.45■□□□□ 0.22
WNT3AP56704 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.45■□□□□ 0.22
WNT3AP56704 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.45■□□□□ 0.22
WNT3AP56704 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
WNT3AP56704 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
WNT3AP56704 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.45■□□□□ 0.22
WNT3AP56704 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms