Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.45■□□□□ 0.38
RAD23BP54727 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RAD23BP54727 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.45■□□□□ 0.38
RAD23BP54727 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.45■□□□□ 0.38
RAD23BP54727 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.45■□□□□ 0.38
RAD23BP54727 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.45■□□□□ 0.38
RAD23BP54727 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.45■□□□□ 0.38
RAD23BP54727 DNAJB3-202ENST00000449667 1266 ntBASIC17.45■□□□□ 0.38
RAD23BP54727 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.45■□□□□ 0.38
RAD23BP54727 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.45■□□□□ 0.38
RAD23BP54727 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.45■□□□□ 0.38
RAD23BP54727 IGHV3-62-201ENST00000520057 340 ntBASIC17.45■□□□□ 0.38
RAD23BP54727 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.45■□□□□ 0.38
RAD23BP54727 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.45■□□□□ 0.38
RAD23BP54727 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.45■□□□□ 0.38
RAD23BP54727 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.45■□□□□ 0.38
RAD23BP54727 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.45■□□□□ 0.38
RAD23BP54727 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 AL592424.1-201ENST00000563624 1536 ntBASIC17.45■□□□□ 0.38
RAD23BP54727 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAD23BP54727 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.45■□□□□ 0.38
RAD23BP54727 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RAD23BP54727 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.45■□□□□ 0.38
RAD23BP54727 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.44■□□□□ 0.38
RAD23BP54727 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAD23BP54727 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.44■□□□□ 0.38
RAD23BP54727 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAD23BP54727 U82695.1-201ENST00000635752 1889 ntBASIC17.44■□□□□ 0.38
RAD23BP54727 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.44■□□□□ 0.38
RAD23BP54727 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 AL627223.1-201ENST00000416693 442 ntBASIC17.44■□□□□ 0.38
RAD23BP54727 FAM58DP-201ENST00000428076 619 ntBASIC17.44■□□□□ 0.38
RAD23BP54727 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.44■□□□□ 0.38
RAD23BP54727 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.44■□□□□ 0.38
RAD23BP54727 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.44■□□□□ 0.38
RAD23BP54727 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 AL691403.2-201ENST00000618460 490 ntBASIC17.44■□□□□ 0.38
RAD23BP54727 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.44■□□□□ 0.38
RAD23BP54727 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
RAD23BP54727 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
RAD23BP54727 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.44■□□□□ 0.38
RAD23BP54727 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.44■□□□□ 0.38
RAD23BP54727 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
RAD23BP54727 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
RAD23BP54727 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RAD23BP54727 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAD23BP54727 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAD23BP54727 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAD23BP54727 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms