Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.92■□□□□ 0.46
PMS1P54277 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PMS1P54277 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.92■□□□□ 0.46
PMS1P54277 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PMS1P54277 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.92■□□□□ 0.46
PMS1P54277 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PMS1P54277 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PMS1P54277 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.91■□□□□ 0.46
PMS1P54277 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.91■□□□□ 0.46
PMS1P54277 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 AC144831.1-201ENST00000573312 2656 ntBASIC17.91■□□□□ 0.46
PMS1P54277 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.91■□□□□ 0.46
PMS1P54277 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.91■□□□□ 0.46
PMS1P54277 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.91■□□□□ 0.46
PMS1P54277 MED15P5-201ENST00000423150 992 ntBASIC17.91■□□□□ 0.46
PMS1P54277 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.91■□□□□ 0.46
PMS1P54277 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.91■□□□□ 0.46
PMS1P54277 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PMS1P54277 PRYP6-201ENST00000514804 343 ntBASIC17.91■□□□□ 0.46
PMS1P54277 AC027601.4-201ENST00000611259 610 ntBASIC17.91■□□□□ 0.46
PMS1P54277 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.91■□□□□ 0.46
PMS1P54277 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.91■□□□□ 0.46
PMS1P54277 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PMS1P54277 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PMS1P54277 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PMS1P54277 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.91■□□□□ 0.46
PMS1P54277 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.91■□□□□ 0.46
PMS1P54277 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.91■□□□□ 0.46
PMS1P54277 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.91■□□□□ 0.46
PMS1P54277 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PMS1P54277 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PMS1P54277 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
PMS1P54277 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.9■□□□□ 0.46
PMS1P54277 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
PMS1P54277 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PMS1P54277 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PMS1P54277 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.9■□□□□ 0.46
PMS1P54277 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PMS1P54277 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PMS1P54277 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PMS1P54277 AC026396.1-201ENST00000419388 421 ntBASIC17.9■□□□□ 0.46
PMS1P54277 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.9■□□□□ 0.46
PMS1P54277 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
PMS1P54277 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PMS1P54277 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.9■□□□□ 0.46
PMS1P54277 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
PMS1P54277 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
PMS1P54277 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PMS1P54277 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PMS1P54277 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.9■□□□□ 0.46
PMS1P54277 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.9■□□□□ 0.46
PMS1P54277 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
PMS1P54277 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
PMS1P54277 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PMS1P54277 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.89■□□□□ 0.45
PMS1P54277 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PMS1P54277 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms