Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HCFC1P51610 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HCFC1P51610 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
HCFC1P51610 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.09□□□□□ -0.15
HCFC1P51610 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.09□□□□□ -0.15
HCFC1P51610 AGGF1P2-201ENST00000426656 2106 ntBASIC14.09□□□□□ -0.15
HCFC1P51610 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.09□□□□□ -0.15
HCFC1P51610 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HCFC1P51610 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.09□□□□□ -0.15
HCFC1P51610 AC025048.3-201ENST00000590609 569 ntBASIC14.09□□□□□ -0.15
HCFC1P51610 AC005702.4-201ENST00000618393 416 ntBASIC14.09□□□□□ -0.15
HCFC1P51610 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HCFC1P51610 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.09□□□□□ -0.15
HCFC1P51610 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.09□□□□□ -0.15
HCFC1P51610 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 AC018665.1-201ENST00000622927 1362 ntBASIC14.09□□□□□ -0.15
HCFC1P51610 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
HCFC1P51610 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 FLJ38576-201ENST00000623820 2459 ntBASIC14.09□□□□□ -0.15
HCFC1P51610 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HCFC1P51610 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
HCFC1P51610 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HCFC1P51610 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
HCFC1P51610 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
HCFC1P51610 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HCFC1P51610 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.08□□□□□ -0.15
HCFC1P51610 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.08□□□□□ -0.15
HCFC1P51610 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.08□□□□□ -0.15
HCFC1P51610 MIR4321-201ENST00000592276 80 ntBASIC14.08□□□□□ -0.15
HCFC1P51610 MIR8072-201ENST00000614241 80 ntBASIC14.08□□□□□ -0.15
HCFC1P51610 AC106886.4-201ENST00000623557 2502 ntBASIC14.08□□□□□ -0.15
HCFC1P51610 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HCFC1P51610 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.08□□□□□ -0.15
HCFC1P51610 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HCFC1P51610 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
HCFC1P51610 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.08□□□□□ -0.16
HCFC1P51610 AL512652.2-201ENST00000625156 1716 ntBASIC14.08□□□□□ -0.16
HCFC1P51610 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 PCGF3-213ENST00000620529 1899 ntBASIC14.08□□□□□ -0.16
HCFC1P51610 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.08□□□□□ -0.16
HCFC1P51610 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.08□□□□□ -0.16
HCFC1P51610 PDIA3P1-201ENST00000471856 1510 ntBASIC14.08□□□□□ -0.16
HCFC1P51610 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HCFC1P51610 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.08□□□□□ -0.16
HCFC1P51610 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.08□□□□□ -0.16
HCFC1P51610 AC022210.1-201ENST00000449856 793 ntBASIC14.08□□□□□ -0.16
HCFC1P51610 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.08□□□□□ -0.16
HCFC1P51610 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.08□□□□□ -0.16
HCFC1P51610 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.08□□□□□ -0.16
HCFC1P51610 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.08□□□□□ -0.16
HCFC1P51610 MIR4538-201ENST00000581377 78 ntBASIC14.08□□□□□ -0.16
HCFC1P51610 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HCFC1P51610 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HCFC1P51610 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HCFC1P51610 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.08□□□□□ -0.16
HCFC1P51610 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
HCFC1P51610 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCFC1P51610 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.08□□□□□ -0.16
HCFC1P51610 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HCFC1P51610 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.08□□□□□ -0.16
HCFC1P51610 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HCFC1P51610 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCFC1P51610 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HCFC1P51610 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
HCFC1P51610 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCFC1P51610 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCFC1P51610 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCFC1P51610 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCFC1P51610 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.07□□□□□ -0.16
HCFC1P51610 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCFC1P51610 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HCFC1P51610 BCYRN1-201ENST00000418539 200 ntBASIC14.07□□□□□ -0.16
HCFC1P51610 MEP1AP4-201ENST00000423244 1087 ntBASIC14.07□□□□□ -0.16
HCFC1P51610 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.07□□□□□ -0.16
HCFC1P51610 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms