Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RNF144AP50876 TSPY26P-202ENST00000565928 3884 ntBASIC15.22■□□□□ 0.03
RNF144AP50876 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RNF144AP50876 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF144AP50876 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF144AP50876 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.22■□□□□ 0.03
RNF144AP50876 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF144AP50876 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF144AP50876 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF144AP50876 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF144AP50876 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF144AP50876 AC007064.4-201ENST00000637740 555 ntBASIC15.22■□□□□ 0.03
RNF144AP50876 AL645728.2-201ENST00000641974 660 ntBASIC15.22■□□□□ 0.03
RNF144AP50876 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF144AP50876 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 AC010491.1-201ENST00000563101 2797 ntBASIC15.22■□□□□ 0.03
RNF144AP50876 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RNF144AP50876 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RNF144AP50876 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF144AP50876 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
RNF144AP50876 AC016027.1-202ENST00000607927 1699 ntBASIC15.22■□□□□ 0.03
RNF144AP50876 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF144AP50876 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 AC105917.1-201ENST00000506637 2539 ntBASIC15.21■□□□□ 0.03
RNF144AP50876 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 RN7SL832P-201ENST00000607781 1756 ntBASIC15.21■□□□□ 0.03
RNF144AP50876 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF144AP50876 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF144AP50876 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF144AP50876 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF144AP50876 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 PRAL-201ENST00000624952 3286 ntBASIC15.21■□□□□ 0.03
RNF144AP50876 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RNF144AP50876 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RNF144AP50876 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF144AP50876 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF144AP50876 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF144AP50876 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF144AP50876 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF144AP50876 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 AL596087.1-201ENST00000400979 1969 ntBASIC15.21■□□□□ 0.03
RNF144AP50876 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF144AP50876 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF144AP50876 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF144AP50876 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF144AP50876 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF144AP50876 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF144AP50876 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF144AP50876 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF144AP50876 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF144AP50876 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF144AP50876 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF144AP50876 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
RNF144AP50876 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF144AP50876 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF144AP50876 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF144AP50876 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF144AP50876 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF144AP50876 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF144AP50876 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF144AP50876 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF144AP50876 AL365203.3-201ENST00000609742 2057 ntBASIC15.2■□□□□ 0.02
RNF144AP50876 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms