Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KDM5CP41229 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.95■■□□□ 1.42
KDM5CP41229 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KDM5CP41229 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KDM5CP41229 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
KDM5CP41229 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KDM5CP41229 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KDM5CP41229 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC23.95■■□□□ 1.42
KDM5CP41229 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC23.95■■□□□ 1.42
KDM5CP41229 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KDM5CP41229 USP40-206ENST00000443711 628 ntTSL 2 BASIC23.95■■□□□ 1.42
KDM5CP41229 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
KDM5CP41229 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KDM5CP41229 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC23.95■■□□□ 1.42
KDM5CP41229 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC23.95■■□□□ 1.42
KDM5CP41229 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC23.95■■□□□ 1.42
KDM5CP41229 ACTG1P17-201ENST00000558391 1119 ntBASIC23.95■■□□□ 1.42
KDM5CP41229 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC23.95■■□□□ 1.42
KDM5CP41229 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KDM5CP41229 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC23.94■■□□□ 1.42
KDM5CP41229 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM5CP41229 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM5CP41229 AC005622.1-201ENST00000636801 1703 ntBASIC23.94■■□□□ 1.42
KDM5CP41229 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
KDM5CP41229 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC23.94■■□□□ 1.42
KDM5CP41229 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM5CP41229 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
KDM5CP41229 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM5CP41229 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM5CP41229 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM5CP41229 MIR663B-201ENST00000408361 115 ntBASIC23.94■■□□□ 1.42
KDM5CP41229 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KDM5CP41229 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC23.94■■□□□ 1.42
KDM5CP41229 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KDM5CP41229 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC23.94■■□□□ 1.42
KDM5CP41229 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KDM5CP41229 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM5CP41229 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC23.94■■□□□ 1.42
KDM5CP41229 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
KDM5CP41229 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC23.94■■□□□ 1.42
KDM5CP41229 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC23.93■■□□□ 1.42
KDM5CP41229 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC23.93■■□□□ 1.42
KDM5CP41229 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC23.93■■□□□ 1.42
KDM5CP41229 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC23.93■■□□□ 1.42
KDM5CP41229 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC23.93■■□□□ 1.42
KDM5CP41229 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 OARD1-212ENST00000482515 832 ntTSL 2 BASIC23.93■■□□□ 1.42
KDM5CP41229 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC23.93■■□□□ 1.42
KDM5CP41229 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
KDM5CP41229 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC23.93■■□□□ 1.42
KDM5CP41229 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
KDM5CP41229 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KDM5CP41229 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KDM5CP41229 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC23.92■■□□□ 1.42
KDM5CP41229 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
KDM5CP41229 GUK1-206ENST00000366723 845 ntTSL 5 BASIC23.92■■□□□ 1.42
KDM5CP41229 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC23.92■■□□□ 1.42
KDM5CP41229 Z93015.1-201ENST00000451718 390 ntBASIC23.92■■□□□ 1.42
KDM5CP41229 PFN2-215ENST00000497148 743 ntTSL 4 BASIC23.92■■□□□ 1.42
KDM5CP41229 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
KDM5CP41229 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
KDM5CP41229 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC23.92■■□□□ 1.42
KDM5CP41229 AC107373.2-201ENST00000607735 490 ntBASIC23.92■■□□□ 1.42
KDM5CP41229 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC23.92■■□□□ 1.42
KDM5CP41229 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC23.92■■□□□ 1.42
KDM5CP41229 AC091271.1-201ENST00000611877 1162 ntBASIC23.92■■□□□ 1.42
KDM5CP41229 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC23.92■■□□□ 1.42
KDM5CP41229 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC23.92■■□□□ 1.42
KDM5CP41229 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC23.92■■□□□ 1.42
KDM5CP41229 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
KDM5CP41229 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
KDM5CP41229 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC23.92■■□□□ 1.42
KDM5CP41229 AC080080.1-201ENST00000625121 2420 ntBASIC23.92■■□□□ 1.42
KDM5CP41229 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC23.92■■□□□ 1.42
KDM5CP41229 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KDM5CP41229 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC23.92■■□□□ 1.42
KDM5CP41229 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
KDM5CP41229 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
KDM5CP41229 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KDM5CP41229 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
KDM5CP41229 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
KDM5CP41229 GRN-222ENST00000639447 1314 ntTSL 2 BASIC23.91■■□□□ 1.42
KDM5CP41229 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC23.91■■□□□ 1.42
KDM5CP41229 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms