Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.2■□□□□ 0.34
RFC1P35251 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.2■□□□□ 0.34
RFC1P35251 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFC1P35251 FAM58CP-201ENST00000435741 640 ntBASIC17.2■□□□□ 0.34
RFC1P35251 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
RFC1P35251 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RFC1P35251 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.2■□□□□ 0.34
RFC1P35251 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RFC1P35251 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RFC1P35251 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.2■□□□□ 0.34
RFC1P35251 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
RFC1P35251 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.2■□□□□ 0.34
RFC1P35251 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RFC1P35251 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 PMS2P7-201ENST00000506558 1336 ntBASIC17.2■□□□□ 0.34
RFC1P35251 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.2■□□□□ 0.34
RFC1P35251 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RFC1P35251 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.19■□□□□ 0.34
RFC1P35251 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RFC1P35251 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.19■□□□□ 0.34
RFC1P35251 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
RFC1P35251 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.19■□□□□ 0.34
RFC1P35251 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.19■□□□□ 0.34
RFC1P35251 AC004832.2-201ENST00000426397 482 ntBASIC17.19■□□□□ 0.34
RFC1P35251 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.19■□□□□ 0.34
RFC1P35251 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
RFC1P35251 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.19■□□□□ 0.34
RFC1P35251 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.19■□□□□ 0.34
RFC1P35251 AL603832.2-201ENST00000566195 2125 ntBASIC17.19■□□□□ 0.34
RFC1P35251 RARRES2P8-201ENST00000566335 367 ntBASIC17.19■□□□□ 0.34
RFC1P35251 AL138918.1-201ENST00000568306 659 ntBASIC17.19■□□□□ 0.34
RFC1P35251 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.19■□□□□ 0.34
RFC1P35251 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.19■□□□□ 0.34
RFC1P35251 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.19■□□□□ 0.34
RFC1P35251 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.19■□□□□ 0.34
RFC1P35251 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFC1P35251 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.19■□□□□ 0.34
RFC1P35251 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFC1P35251 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.19■□□□□ 0.34
RFC1P35251 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 AC010491.1-201ENST00000563101 2797 ntBASIC17.18■□□□□ 0.34
RFC1P35251 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC1P35251 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC1P35251 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RFC1P35251 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RFC1P35251 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RFC1P35251 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RFC1P35251 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC1P35251 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC1P35251 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RFC1P35251 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.18■□□□□ 0.34
RFC1P35251 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 AL355306.1-201ENST00000415580 579 ntBASIC17.18■□□□□ 0.34
RFC1P35251 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.18■□□□□ 0.34
RFC1P35251 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.18■□□□□ 0.34
RFC1P35251 AL671277.1-201ENST00000429656 993 ntBASIC17.18■□□□□ 0.34
RFC1P35251 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.18■□□□□ 0.34
RFC1P35251 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.18■□□□□ 0.34
RFC1P35251 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RFC1P35251 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.18■□□□□ 0.34
RFC1P35251 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
RFC1P35251 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
RFC1P35251 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC1P35251 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms