Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXC12P31275 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXC12P31275 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HOXC12P31275 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXC12P31275 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXC12P31275 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HOXC12P31275 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.51□□□□□ -0.09
HOXC12P31275 UXT-AS1-201ENST00000590504 1525 ntBASIC14.51□□□□□ -0.09
HOXC12P31275 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXC12P31275 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.51□□□□□ -0.09
HOXC12P31275 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HOXC12P31275 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
HOXC12P31275 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HOXC12P31275 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.5□□□□□ -0.09
HOXC12P31275 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 AL603756.1-201ENST00000606511 2163 ntBASIC14.5□□□□□ -0.09
HOXC12P31275 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.5□□□□□ -0.09
HOXC12P31275 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HOXC12P31275 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
HOXC12P31275 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HOXC12P31275 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.5□□□□□ -0.09
HOXC12P31275 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.5□□□□□ -0.09
HOXC12P31275 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HOXC12P31275 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.5□□□□□ -0.09
HOXC12P31275 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.5□□□□□ -0.09
HOXC12P31275 FAM207CP-201ENST00000443486 507 ntBASIC14.5□□□□□ -0.09
HOXC12P31275 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.5□□□□□ -0.09
HOXC12P31275 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.5□□□□□ -0.09
HOXC12P31275 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.5□□□□□ -0.09
HOXC12P31275 KRT8P23-201ENST00000560090 1207 ntBASIC14.5□□□□□ -0.09
HOXC12P31275 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.5□□□□□ -0.09
HOXC12P31275 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
HOXC12P31275 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.5□□□□□ -0.09
HOXC12P31275 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
HOXC12P31275 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HOXC12P31275 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.5□□□□□ -0.09
HOXC12P31275 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HOXC12P31275 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HOXC12P31275 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HOXC12P31275 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HOXC12P31275 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXC12P31275 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.49□□□□□ -0.09
HOXC12P31275 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HOXC12P31275 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.49□□□□□ -0.09
HOXC12P31275 TUBB3P1-201ENST00000405796 1332 ntBASIC14.49□□□□□ -0.09
HOXC12P31275 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HOXC12P31275 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.49□□□□□ -0.09
HOXC12P31275 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.49□□□□□ -0.09
HOXC12P31275 MIR661-201ENST00000384842 89 ntBASIC14.49□□□□□ -0.09
HOXC12P31275 MIR943-201ENST00000401286 94 ntBASIC14.49□□□□□ -0.09
HOXC12P31275 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
HOXC12P31275 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.49□□□□□ -0.09
HOXC12P31275 KRT8P48-201ENST00000515599 1220 ntBASIC14.49□□□□□ -0.09
HOXC12P31275 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.49□□□□□ -0.09
HOXC12P31275 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.49□□□□□ -0.09
HOXC12P31275 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.49□□□□□ -0.09
HOXC12P31275 AC008267.7-201ENST00000624570 1194 ntBASIC14.49□□□□□ -0.09
HOXC12P31275 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.49□□□□□ -0.09
HOXC12P31275 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HOXC12P31275 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HOXC12P31275 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HOXC12P31275 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.49□□□□□ -0.09
HOXC12P31275 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.49□□□□□ -0.09
HOXC12P31275 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms