Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CD40LGP29965 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CD40LGP29965 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.52□□□□□ -0.09
CD40LGP29965 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.52□□□□□ -0.09
CD40LGP29965 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.52□□□□□ -0.09
CD40LGP29965 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.52□□□□□ -0.09
CD40LGP29965 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.52□□□□□ -0.09
CD40LGP29965 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
CD40LGP29965 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.52□□□□□ -0.09
CD40LGP29965 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 MROH4P-201ENST00000431302 1578 ntBASIC14.51□□□□□ -0.09
CD40LGP29965 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CD40LGP29965 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.51□□□□□ -0.09
CD40LGP29965 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CD40LGP29965 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 AC010327.5-201ENST00000586923 3061 ntBASIC14.51□□□□□ -0.09
CD40LGP29965 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.51□□□□□ -0.09
CD40LGP29965 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.51□□□□□ -0.09
CD40LGP29965 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CD40LGP29965 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CD40LGP29965 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.51□□□□□ -0.09
CD40LGP29965 TSPY12P-201ENST00000421279 868 ntBASIC14.51□□□□□ -0.09
CD40LGP29965 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.51□□□□□ -0.09
CD40LGP29965 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.51□□□□□ -0.09
CD40LGP29965 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.51□□□□□ -0.09
CD40LGP29965 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
CD40LGP29965 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.51□□□□□ -0.09
CD40LGP29965 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.51□□□□□ -0.09
CD40LGP29965 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.51□□□□□ -0.09
CD40LGP29965 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.51□□□□□ -0.09
CD40LGP29965 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CD40LGP29965 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 AP003680.1-201ENST00000598970 3660 ntBASIC14.51□□□□□ -0.09
CD40LGP29965 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CD40LGP29965 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.51□□□□□ -0.09
CD40LGP29965 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40LGP29965 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CD40LGP29965 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40LGP29965 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CD40LGP29965 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40LGP29965 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.5□□□□□ -0.09
CD40LGP29965 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CD40LGP29965 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40LGP29965 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40LGP29965 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.5□□□□□ -0.09
CD40LGP29965 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40LGP29965 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.5□□□□□ -0.09
CD40LGP29965 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40LGP29965 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CD40LGP29965 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CD40LGP29965 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CD40LGP29965 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40LGP29965 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40LGP29965 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CD40LGP29965 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40LGP29965 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40LGP29965 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.5□□□□□ -0.09
CD40LGP29965 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CD40LGP29965 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40LGP29965 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms