Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
COL8A2P25067 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL8A2P25067 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
COL8A2P25067 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
COL8A2P25067 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL8A2P25067 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 MTND6P24-201ENST00000440466 518 ntBASIC13.77□□□□□ -0.21
COL8A2P25067 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 TSPY16P-201ENST00000449843 468 ntBASIC13.77□□□□□ -0.21
COL8A2P25067 UGT1A2P-201ENST00000454886 866 ntBASIC13.77□□□□□ -0.21
COL8A2P25067 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
COL8A2P25067 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.77□□□□□ -0.21
COL8A2P25067 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.77□□□□□ -0.21
COL8A2P25067 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.77□□□□□ -0.21
COL8A2P25067 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.77□□□□□ -0.21
COL8A2P25067 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.77□□□□□ -0.21
COL8A2P25067 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.77□□□□□ -0.21
COL8A2P25067 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
COL8A2P25067 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.77□□□□□ -0.21
COL8A2P25067 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.77□□□□□ -0.21
COL8A2P25067 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.77□□□□□ -0.21
COL8A2P25067 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.77□□□□□ -0.21
COL8A2P25067 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.77□□□□□ -0.21
COL8A2P25067 RN7SL828P-201ENST00000607615 303 ntBASIC13.77□□□□□ -0.21
COL8A2P25067 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.77□□□□□ -0.21
COL8A2P25067 AL590560.3-201ENST00000623350 461 ntBASIC13.77□□□□□ -0.21
COL8A2P25067 AC073592.8-201ENST00000624126 511 ntBASIC13.77□□□□□ -0.21
COL8A2P25067 AC005622.1-201ENST00000636801 1703 ntBASIC13.77□□□□□ -0.21
COL8A2P25067 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
COL8A2P25067 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL8A2P25067 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.77□□□□□ -0.21
COL8A2P25067 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
COL8A2P25067 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
COL8A2P25067 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.76□□□□□ -0.21
COL8A2P25067 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
COL8A2P25067 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
COL8A2P25067 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.76□□□□□ -0.21
COL8A2P25067 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.76□□□□□ -0.21
COL8A2P25067 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.76□□□□□ -0.21
COL8A2P25067 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
COL8A2P25067 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.76□□□□□ -0.21
COL8A2P25067 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.76□□□□□ -0.21
COL8A2P25067 AC241585.1-201ENST00000433527 519 ntBASIC13.76□□□□□ -0.21
COL8A2P25067 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.76□□□□□ -0.21
COL8A2P25067 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.76□□□□□ -0.21
COL8A2P25067 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.76□□□□□ -0.21
COL8A2P25067 AC105021.1-202ENST00000570572 669 ntBASIC13.76□□□□□ -0.21
COL8A2P25067 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.76□□□□□ -0.21
COL8A2P25067 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
COL8A2P25067 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.76□□□□□ -0.21
COL8A2P25067 AL138828.2-201ENST00000615812 383 ntBASIC13.76□□□□□ -0.21
COL8A2P25067 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.76□□□□□ -0.21
COL8A2P25067 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL8A2P25067 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
COL8A2P25067 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.76□□□□□ -0.21
COL8A2P25067 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
COL8A2P25067 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
COL8A2P25067 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
COL8A2P25067 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
COL8A2P25067 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.75□□□□□ -0.21
COL8A2P25067 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 AL035456.1-201ENST00000456064 1369 ntBASIC13.75□□□□□ -0.21
COL8A2P25067 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.75□□□□□ -0.21
COL8A2P25067 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.75□□□□□ -0.21
COL8A2P25067 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.75□□□□□ -0.21
COL8A2P25067 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.75□□□□□ -0.21
COL8A2P25067 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
COL8A2P25067 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms