Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.99□□□□□ -0.17
TNFSF4P23510 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.99□□□□□ -0.17
TNFSF4P23510 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
TNFSF4P23510 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TNFSF4P23510 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.98□□□□□ -0.17
TNFSF4P23510 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TNFSF4P23510 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFSF4P23510 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
TNFSF4P23510 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.98□□□□□ -0.17
TNFSF4P23510 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TNFSF4P23510 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFSF4P23510 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.98□□□□□ -0.17
TNFSF4P23510 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.98□□□□□ -0.17
TNFSF4P23510 AC023141.5-201ENST00000458585 616 ntBASIC13.98□□□□□ -0.17
TNFSF4P23510 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.98□□□□□ -0.17
TNFSF4P23510 AP001160.2-201ENST00000596071 487 ntBASIC13.98□□□□□ -0.17
TNFSF4P23510 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.98□□□□□ -0.17
TNFSF4P23510 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.98□□□□□ -0.17
TNFSF4P23510 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
TNFSF4P23510 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.98□□□□□ -0.17
TNFSF4P23510 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 AC073439.1-201ENST00000624121 1774 ntBASIC13.98□□□□□ -0.17
TNFSF4P23510 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
TNFSF4P23510 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFSF4P23510 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFSF4P23510 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TNFSF4P23510 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.98□□□□□ -0.17
TNFSF4P23510 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFSF4P23510 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFSF4P23510 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFSF4P23510 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 UBALD1-205ENST00000590891 2641 ntBASIC13.97□□□□□ -0.17
TNFSF4P23510 U82695.1-201ENST00000635752 1889 ntBASIC13.97□□□□□ -0.17
TNFSF4P23510 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
TNFSF4P23510 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TNFSF4P23510 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TNFSF4P23510 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 AL627223.1-201ENST00000416693 442 ntBASIC13.97□□□□□ -0.17
TNFSF4P23510 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.97□□□□□ -0.17
TNFSF4P23510 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.97□□□□□ -0.17
TNFSF4P23510 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
TNFSF4P23510 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.97□□□□□ -0.17
TNFSF4P23510 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
TNFSF4P23510 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms