Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
POLR3DP05423 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
POLR3DP05423 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
POLR3DP05423 MTND6P24-201ENST00000440466 518 ntBASIC19.46■□□□□ 0.71
POLR3DP05423 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.46■□□□□ 0.71
POLR3DP05423 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
POLR3DP05423 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR3DP05423 ALOX12P2-203ENST00000570921 1945 ntBASIC19.46■□□□□ 0.71
POLR3DP05423 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR3DP05423 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR3DP05423 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.46■□□□□ 0.71
POLR3DP05423 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR3DP05423 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR3DP05423 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.46■□□□□ 0.71
POLR3DP05423 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR3DP05423 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR3DP05423 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR3DP05423 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.45■□□□□ 0.7
POLR3DP05423 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
POLR3DP05423 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR3DP05423 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.45■□□□□ 0.7
POLR3DP05423 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
POLR3DP05423 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.45■□□□□ 0.7
POLR3DP05423 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR3DP05423 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.45■□□□□ 0.7
POLR3DP05423 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR3DP05423 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 SPDYE12P-201ENST00000618416 771 ntBASIC19.45■□□□□ 0.7
POLR3DP05423 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
POLR3DP05423 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR3DP05423 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR3DP05423 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
POLR3DP05423 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
POLR3DP05423 AL035456.1-201ENST00000456064 1369 ntBASIC19.44■□□□□ 0.7
POLR3DP05423 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR3DP05423 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
POLR3DP05423 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR3DP05423 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
POLR3DP05423 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR3DP05423 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR3DP05423 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 GGT3P-204ENST00000453783 1664 ntBASIC19.44■□□□□ 0.7
POLR3DP05423 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 AC241585.1-201ENST00000433527 519 ntBASIC19.44■□□□□ 0.7
POLR3DP05423 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.44■□□□□ 0.7
POLR3DP05423 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR3DP05423 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.44■□□□□ 0.7
POLR3DP05423 AC105021.1-202ENST00000570572 669 ntBASIC19.44■□□□□ 0.7
POLR3DP05423 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR3DP05423 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR3DP05423 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.44■□□□□ 0.7
POLR3DP05423 AC024267.1-201ENST00000582320 895 ntBASIC19.44■□□□□ 0.7
POLR3DP05423 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR3DP05423 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR3DP05423 AL138828.2-201ENST00000615812 383 ntBASIC19.44■□□□□ 0.7
POLR3DP05423 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
POLR3DP05423 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR3DP05423 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR3DP05423 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR3DP05423 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR3DP05423 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR3DP05423 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR3DP05423 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
POLR3DP05423 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR3DP05423 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR3DP05423 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR3DP05423 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
POLR3DP05423 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR3DP05423 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR3DP05423 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR3DP05423 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR3DP05423 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR3DP05423 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR3DP05423 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms