Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHGBP05060 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHGBP05060 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.5■□□□□ 0.71
CHGBP05060 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CHGBP05060 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHGBP05060 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CHGBP05060 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.5■□□□□ 0.71
CHGBP05060 CYP2T1P-202ENST00000641596 2535 ntBASIC19.5■□□□□ 0.71
CHGBP05060 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.5■□□□□ 0.71
CHGBP05060 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHGBP05060 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.5■□□□□ 0.71
CHGBP05060 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
CHGBP05060 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHGBP05060 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHGBP05060 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CHGBP05060 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CHGBP05060 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHGBP05060 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.49■□□□□ 0.71
CHGBP05060 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.49■□□□□ 0.71
CHGBP05060 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.49■□□□□ 0.71
CHGBP05060 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.49■□□□□ 0.71
CHGBP05060 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.49■□□□□ 0.71
CHGBP05060 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.49■□□□□ 0.71
CHGBP05060 AL390754.1-201ENST00000619088 582 ntBASIC19.49■□□□□ 0.71
CHGBP05060 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.49■□□□□ 0.71
CHGBP05060 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CHGBP05060 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.49■□□□□ 0.71
CHGBP05060 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.49■□□□□ 0.71
CHGBP05060 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.49■□□□□ 0.71
CHGBP05060 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHGBP05060 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CHGBP05060 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHGBP05060 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.48■□□□□ 0.71
CHGBP05060 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CHGBP05060 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 AL080243.2-201ENST00000418783 582 ntBASIC19.48■□□□□ 0.71
CHGBP05060 TSSK5P-201ENST00000423978 907 ntBASIC19.48■□□□□ 0.71
CHGBP05060 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.48■□□□□ 0.71
CHGBP05060 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.48■□□□□ 0.71
CHGBP05060 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHGBP05060 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.48■□□□□ 0.71
CHGBP05060 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.48■□□□□ 0.71
CHGBP05060 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.48■□□□□ 0.71
CHGBP05060 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CHGBP05060 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHGBP05060 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.48■□□□□ 0.71
CHGBP05060 CYP4F24P-201ENST00000586049 1580 ntBASIC19.48■□□□□ 0.71
CHGBP05060 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.48■□□□□ 0.71
CHGBP05060 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.48■□□□□ 0.71
CHGBP05060 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHGBP05060 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.47■□□□□ 0.71
CHGBP05060 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CHGBP05060 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHGBP05060 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.47■□□□□ 0.71
CHGBP05060 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
CHGBP05060 AC132872.4-202ENST00000622924 2756 ntBASIC19.47■□□□□ 0.71
CHGBP05060 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.47■□□□□ 0.71
CHGBP05060 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.47■□□□□ 0.71
CHGBP05060 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CHGBP05060 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms