Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPNS1P04632 HLA-A-202ENST00000376806 1854 ntBASIC16.25■□□□□ 0.19
CAPNS1P04632 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CAPNS1P04632 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CAPNS1P04632 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.24■□□□□ 0.19
CAPNS1P04632 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CAPNS1P04632 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 TSSK5P-201ENST00000423978 907 ntBASIC16.24■□□□□ 0.19
CAPNS1P04632 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 AC241585.1-201ENST00000433527 519 ntBASIC16.24■□□□□ 0.19
CAPNS1P04632 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 STK19B-204ENST00000512515 211 ntBASIC16.24■□□□□ 0.19
CAPNS1P04632 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.24■□□□□ 0.19
CAPNS1P04632 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CAPNS1P04632 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.24■□□□□ 0.19
CAPNS1P04632 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 HILS1-202ENST00000545329 423 ntBASIC16.24■□□□□ 0.19
CAPNS1P04632 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.24■□□□□ 0.19
CAPNS1P04632 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.24■□□□□ 0.19
CAPNS1P04632 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.24■□□□□ 0.19
CAPNS1P04632 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.24■□□□□ 0.19
CAPNS1P04632 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CAPNS1P04632 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPNS1P04632 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CAPNS1P04632 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CAPNS1P04632 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPNS1P04632 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPNS1P04632 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPNS1P04632 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CAPNS1P04632 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.23■□□□□ 0.19
CAPNS1P04632 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 AC009336.1-201ENST00000608941 1553 ntBASIC16.23■□□□□ 0.19
CAPNS1P04632 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPNS1P04632 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CAPNS1P04632 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CAPNS1P04632 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CAPNS1P04632 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.23■□□□□ 0.19
CAPNS1P04632 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPNS1P04632 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.23■□□□□ 0.19
CAPNS1P04632 RARRES2P8-201ENST00000566335 367 ntBASIC16.23■□□□□ 0.19
CAPNS1P04632 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.23■□□□□ 0.19
CAPNS1P04632 AC109462.3-201ENST00000573934 613 ntBASIC16.23■□□□□ 0.19
CAPNS1P04632 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPNS1P04632 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPNS1P04632 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPNS1P04632 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPNS1P04632 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPNS1P04632 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPNS1P04632 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPNS1P04632 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPNS1P04632 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CAPNS1P04632 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPNS1P04632 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CAPNS1P04632 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CAPNS1P04632 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms