Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.95□□□□□ -0.34
IFNA1P01562 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.95□□□□□ -0.34
IFNA1P01562 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 IGHGP-201ENST00000390555 1178 ntBASIC12.95□□□□□ -0.34
IFNA1P01562 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.95□□□□□ -0.34
IFNA1P01562 FAM220CP-201ENST00000395253 831 ntBASIC12.95□□□□□ -0.34
IFNA1P01562 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.95□□□□□ -0.34
IFNA1P01562 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.95□□□□□ -0.34
IFNA1P01562 AC128688.1-201ENST00000487626 519 ntBASIC12.95□□□□□ -0.34
IFNA1P01562 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.95□□□□□ -0.34
IFNA1P01562 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.95□□□□□ -0.34
IFNA1P01562 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 AL353593.2-201ENST00000602529 1483 ntBASIC12.95□□□□□ -0.34
IFNA1P01562 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
IFNA1P01562 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.95□□□□□ -0.34
IFNA1P01562 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
IFNA1P01562 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.94□□□□□ -0.34
IFNA1P01562 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.94□□□□□ -0.34
IFNA1P01562 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 AL031731.1-201ENST00000642131 2094 ntBASIC12.94□□□□□ -0.34
IFNA1P01562 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.94□□□□□ -0.34
IFNA1P01562 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.94□□□□□ -0.34
IFNA1P01562 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.94□□□□□ -0.34
IFNA1P01562 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.94□□□□□ -0.34
IFNA1P01562 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
IFNA1P01562 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.94□□□□□ -0.34
IFNA1P01562 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 PTENP1-202ENST00000532280 3996 ntBASIC12.94□□□□□ -0.34
IFNA1P01562 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
IFNA1P01562 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.94□□□□□ -0.34
IFNA1P01562 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.94□□□□□ -0.34
IFNA1P01562 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
IFNA1P01562 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IFNA1P01562 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.94□□□□□ -0.34
IFNA1P01562 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
IFNA1P01562 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.93□□□□□ -0.34
IFNA1P01562 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms