Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.38■□□□□ 0.37
TIMP1P01033 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.38■□□□□ 0.37
TIMP1P01033 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.38■□□□□ 0.37
TIMP1P01033 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.38■□□□□ 0.37
TIMP1P01033 GNRHR2-203ENST00000581100 1187 ntBASIC17.38■□□□□ 0.37
TIMP1P01033 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.38■□□□□ 0.37
TIMP1P01033 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
TIMP1P01033 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TIMP1P01033 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.38■□□□□ 0.37
TIMP1P01033 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.38■□□□□ 0.37
TIMP1P01033 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.38■□□□□ 0.37
TIMP1P01033 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.38■□□□□ 0.37
TIMP1P01033 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TIMP1P01033 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TIMP1P01033 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.37■□□□□ 0.37
TIMP1P01033 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.37■□□□□ 0.37
TIMP1P01033 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
TIMP1P01033 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TIMP1P01033 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.37■□□□□ 0.37
TIMP1P01033 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.37■□□□□ 0.37
TIMP1P01033 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.37■□□□□ 0.37
TIMP1P01033 AC104306.2-201ENST00000451877 341 ntBASIC17.37■□□□□ 0.37
TIMP1P01033 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.37■□□□□ 0.37
TIMP1P01033 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.37■□□□□ 0.37
TIMP1P01033 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.37■□□□□ 0.37
TIMP1P01033 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.37■□□□□ 0.37
TIMP1P01033 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.37■□□□□ 0.37
TIMP1P01033 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TIMP1P01033 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.37■□□□□ 0.37
TIMP1P01033 AL021578.1-201ENST00000613646 709 ntBASIC17.37■□□□□ 0.37
TIMP1P01033 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.37■□□□□ 0.37
TIMP1P01033 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TIMP1P01033 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.37■□□□□ 0.37
TIMP1P01033 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.37■□□□□ 0.37
TIMP1P01033 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.37■□□□□ 0.37
TIMP1P01033 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TIMP1P01033 HTR7P1-202ENST00000624664 4411 ntBASIC17.37■□□□□ 0.37
TIMP1P01033 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TIMP1P01033 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.37■□□□□ 0.37
TIMP1P01033 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
TIMP1P01033 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMP1P01033 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMP1P01033 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TIMP1P01033 ACKR1-201ENST00000368121 1240 ntBASIC17.36■□□□□ 0.37
TIMP1P01033 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.36■□□□□ 0.37
TIMP1P01033 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.36■□□□□ 0.37
TIMP1P01033 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMP1P01033 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMP1P01033 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.36■□□□□ 0.37
TIMP1P01033 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMP1P01033 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TIMP1P01033 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMP1P01033 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMP1P01033 LETM1P2-201ENST00000597330 2178 ntBASIC17.36■□□□□ 0.37
TIMP1P01033 AL603756.1-201ENST00000606511 2163 ntBASIC17.36■□□□□ 0.37
TIMP1P01033 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP1P01033 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMP1P01033 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
TIMP1P01033 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TIMP1P01033 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP1P01033 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms