Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 AC005521.1-201ENST00000393351 872 ntBASIC12.28□□□□□ -0.44
SNAI2O43623 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 SPDYE21P-201ENST00000413323 827 ntBASIC12.28□□□□□ -0.44
SNAI2O43623 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.28□□□□□ -0.44
SNAI2O43623 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.28□□□□□ -0.44
SNAI2O43623 AL671277.2-201ENST00000458060 996 ntBASIC12.28□□□□□ -0.44
SNAI2O43623 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.28□□□□□ -0.44
SNAI2O43623 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.28□□□□□ -0.44
SNAI2O43623 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 AC011498.5-201ENST00000592027 486 ntBASIC12.28□□□□□ -0.44
SNAI2O43623 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.28□□□□□ -0.44
SNAI2O43623 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 AC097637.2-201ENST00000624096 1997 ntBASIC12.28□□□□□ -0.44
SNAI2O43623 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.28□□□□□ -0.44
SNAI2O43623 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.28□□□□□ -0.44
SNAI2O43623 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SNAI2O43623 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 SIGLEC16-201ENST00000599858 1437 ntBASIC12.28□□□□□ -0.44
SNAI2O43623 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.28□□□□□ -0.44
SNAI2O43623 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SNAI2O43623 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SNAI2O43623 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SNAI2O43623 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
SNAI2O43623 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.27□□□□□ -0.44
SNAI2O43623 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SNAI2O43623 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SNAI2O43623 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
SNAI2O43623 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SNAI2O43623 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SNAI2O43623 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SNAI2O43623 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SNAI2O43623 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.27□□□□□ -0.44
SNAI2O43623 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.27□□□□□ -0.44
SNAI2O43623 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SNAI2O43623 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SNAI2O43623 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.27□□□□□ -0.45
SNAI2O43623 LINC00982-205ENST00000420957 435 ntBASIC12.27□□□□□ -0.45
SNAI2O43623 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.27□□□□□ -0.45
SNAI2O43623 AC091607.1-201ENST00000490318 1060 ntBASIC12.27□□□□□ -0.45
SNAI2O43623 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.27□□□□□ -0.45
SNAI2O43623 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
SNAI2O43623 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.27□□□□□ -0.45
SNAI2O43623 TERC-201ENST00000602385 541 ntBASIC12.27□□□□□ -0.45
SNAI2O43623 AC004817.3-201ENST00000602957 2129 ntBASIC12.27□□□□□ -0.45
SNAI2O43623 AC133561.5-201ENST00000635547 218 ntBASIC12.27□□□□□ -0.45
SNAI2O43623 AP000867.4-201ENST00000641616 219 ntBASIC12.27□□□□□ -0.45
SNAI2O43623 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.27□□□□□ -0.45
SNAI2O43623 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.27□□□□□ -0.45
SNAI2O43623 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.27□□□□□ -0.45
SNAI2O43623 AC013268.4-201ENST00000637413 2228 ntBASIC12.27□□□□□ -0.45
SNAI2O43623 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.27□□□□□ -0.45
SNAI2O43623 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.27□□□□□ -0.45
SNAI2O43623 AC243591.1-201ENST00000452967 1364 ntBASIC12.27□□□□□ -0.45
SNAI2O43623 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 AL359258.3-201ENST00000622910 2331 ntBASIC12.27□□□□□ -0.45
SNAI2O43623 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
SNAI2O43623 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.27□□□□□ -0.45
SNAI2O43623 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.27□□□□□ -0.45
SNAI2O43623 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.27□□□□□ -0.45
SNAI2O43623 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SNAI2O43623 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SNAI2O43623 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.27□□□□□ -0.45
SNAI2O43623 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms