Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 SLC22A20-204ENST00000530038 1673 ntBASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 PCDHB17P-201ENST00000539533 2393 ntBASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 AC016396.2-201ENST00000562575 1417 ntBASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 FAM207CP-201ENST00000443486 507 ntBASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 TERF1P3-201ENST00000505638 1227 ntBASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 ALG1L8P-201ENST00000533887 760 ntBASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA3Q9Y5H0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 FO538757.1-201ENST00000623083 1397 ntBASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 AC002472.2-201ENST00000442739 958 ntBASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 TSPY16P-201ENST00000449843 468 ntBASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 AC027307.2-201ENST00000591252 911 ntBASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA3Q9Y5H0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms