Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 AL589702.1-201ENST00000641229 1509 ntBASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB2Q9Y5E7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 AC190387.1-201ENST00000551683 408 ntBASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 AL589739.1-201ENST00000607720 493 ntBASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 CETN4P-206ENST00000642099 2168 ntBASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHB2Q9Y5E7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 AC079328.2-201ENST00000561241 3354 ntBASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 RPL37AP1-201ENST00000412502 279 ntBASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 AL133215.2-201ENST00000609242 977 ntBASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB2Q9Y5E7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB2Q9Y5E7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB2Q9Y5E7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB2Q9Y5E7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PCDHB2Q9Y5E7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB2Q9Y5E7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB2Q9Y5E7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB2Q9Y5E7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB2Q9Y5E7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB2Q9Y5E7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms