Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC22.11■■□□□ 1.13
NINLQ9Y2I6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC22.11■■□□□ 1.13
NINLQ9Y2I6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC22.11■■□□□ 1.13
NINLQ9Y2I6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC22.11■■□□□ 1.13
NINLQ9Y2I6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC22.11■■□□□ 1.13
NINLQ9Y2I6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC22.11■■□□□ 1.13
NINLQ9Y2I6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC22.11■■□□□ 1.13
NINLQ9Y2I6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC22.11■■□□□ 1.13
NINLQ9Y2I6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
NINLQ9Y2I6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NINLQ9Y2I6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 RRP7BP-205ENST00000566851 833 ntBASIC22.1■■□□□ 1.13
NINLQ9Y2I6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NINLQ9Y2I6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 AZGP1P1-201ENST00000411909 902 ntBASIC22.09■■□□□ 1.13
NINLQ9Y2I6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 MEP1AP4-201ENST00000423244 1087 ntBASIC22.09■■□□□ 1.13
NINLQ9Y2I6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 AC017083.2-201ENST00000608069 979 ntBASIC22.09■■□□□ 1.13
NINLQ9Y2I6 AL391069.4-201ENST00000609583 481 ntBASIC22.09■■□□□ 1.13
NINLQ9Y2I6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NINLQ9Y2I6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
NINLQ9Y2I6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC22.08■■□□□ 1.13
NINLQ9Y2I6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NINLQ9Y2I6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NINLQ9Y2I6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NINLQ9Y2I6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
NINLQ9Y2I6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
NINLQ9Y2I6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
NINLQ9Y2I6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC22.08■■□□□ 1.13
NINLQ9Y2I6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
NINLQ9Y2I6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
NINLQ9Y2I6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 SPDYE19P-201ENST00000338590 713 ntBASIC22.08■■□□□ 1.12
NINLQ9Y2I6 AC087499.6-201ENST00000411576 835 ntBASIC22.08■■□□□ 1.12
NINLQ9Y2I6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC22.08■■□□□ 1.12
NINLQ9Y2I6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms