Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FNDC3AQ9Y2H6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
FNDC3AQ9Y2H6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FNDC3AQ9Y2H6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FNDC3AQ9Y2H6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
FNDC3AQ9Y2H6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
FNDC3AQ9Y2H6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 HMGA1P7-201ENST00000406908 502 ntBASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 AC092364.2-201ENST00000596710 2692 ntBASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.72■□□□□ 0.27
FNDC3AQ9Y2H6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 AC068587.6-202ENST00000641839 5619 ntBASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 ALOX12P2-203ENST00000570921 1945 ntBASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 MIR943-201ENST00000401286 94 ntBASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 AC236430.1-201ENST00000402231 743 ntBASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 AC015922.1-201ENST00000421102 1152 ntBASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 BASP1P1-201ENST00000430708 665 ntBASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 GPS2P2-201ENST00000430745 888 ntBASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 AL512356.2-201ENST00000546955 174 ntBASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 RARRES2P8-201ENST00000566335 367 ntBASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 AP001059.3-201ENST00000619053 235 ntBASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FNDC3AQ9Y2H6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FNDC3AQ9Y2H6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
FNDC3AQ9Y2H6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.26
FNDC3AQ9Y2H6 TUBB3P1-201ENST00000405796 1332 ntBASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms