Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 COX5BP8-201ENST00000416911 349 ntBASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 AC091167.2-201ENST00000579581 588 ntBASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 AC100757.3-201ENST00000622361 1406 ntBASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 AL513523.2-202ENST00000427283 2040 ntBASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 TSSK5P-201ENST00000423978 907 ntBASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 RN7SL692P-201ENST00000464677 288 ntBASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 AC027369.6-201ENST00000525520 931 ntBASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21■□□□□ 0.95
PDZRN3Q9UPQ7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 AC022144.1-201ENST00000602255 1580 ntBASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 CU639417.3-201ENST00000624240 1404 ntBASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms