Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 AL512638.1-201ENST00000457493 794 ntBASIC15.08■□□□□ 0
NPIPA1Q9UND3 AL138918.1-201ENST00000568306 659 ntBASIC15.08■□□□□ 0
NPIPA1Q9UND3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 AC021097.1-201ENST00000607902 574 ntBASIC15.08■□□□□ 0
NPIPA1Q9UND3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 MIR346-201ENST00000362234 95 ntBASIC15.07■□□□□ 0
NPIPA1Q9UND3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 HLA-J-202ENST00000469281 1241 ntBASIC15.07■□□□□ 0
NPIPA1Q9UND3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 KRT18P34-201ENST00000488218 1270 ntBASIC15.07■□□□□ 0
NPIPA1Q9UND3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 AC013467.2-201ENST00000605472 835 ntBASIC15.07■□□□□ 0
NPIPA1Q9UND3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPA1Q9UND3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NPIPA1Q9UND3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.06■□□□□ 0
NPIPA1Q9UND3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms