Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.34■■□□□ 1.01
PHRF1Q9P1Y6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.34■■□□□ 1.01
PHRF1Q9P1Y6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PHRF1Q9P1Y6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PHRF1Q9P1Y6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.34■■□□□ 1.01
PHRF1Q9P1Y6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 AC025279.2-201ENST00000569730 653 ntBASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 AL118558.3-201ENST00000607414 1079 ntBASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 AC008687.7-202ENST00000637404 953 ntBASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
PHRF1Q9P1Y6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 MTX1P1-201ENST00000440904 838 ntBASIC21.33■■□□□ 1
PHRF1Q9P1Y6 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1
PHRF1Q9P1Y6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 AC009486.1-201ENST00000569860 813 ntBASIC21.32■■□□□ 1
PHRF1Q9P1Y6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHRF1Q9P1Y6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 ACTG1P17-201ENST00000558391 1119 ntBASIC21.31■■□□□ 1
PHRF1Q9P1Y6 HNRNPA1P48-202ENST00000565308 961 ntBASIC21.31■■□□□ 1
PHRF1Q9P1Y6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 AC097359.3-201ENST00000603982 1210 ntBASIC21.31■■□□□ 1
PHRF1Q9P1Y6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.31■■□□□ 1
PHRF1Q9P1Y6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PHRF1Q9P1Y6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.3■■□□□ 1
PHRF1Q9P1Y6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PHRF1Q9P1Y6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PHRF1Q9P1Y6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.3■■□□□ 1
PHRF1Q9P1Y6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms