Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 TNRC18P3-201ENST00000441896 2691 ntBASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 AP001059.3-201ENST00000619053 235 ntBASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 AL603832.2-201ENST00000566195 2125 ntBASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 AC008677.1-201ENST00000519230 1561 ntBASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 PCDHA1-201ENST00000378133 2726 ntBASIC19.82■□□□□ 0.76
ECHDC1Q9NTX5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 AC024909.3-201ENST00000611513 2257 ntBASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 HAUS4P1-201ENST00000406739 1145 ntBASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 TSEN15P1-201ENST00000423257 515 ntBASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 AL512356.2-201ENST00000546955 174 ntBASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 GPALPP1-207ENST00000611650 899 ntBASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 AC018529.1-201ENST00000613063 361 ntBASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 LINC00628-201ENST00000628516 1289 ntBASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC1Q9NTX5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 AC109322.1-201ENST00000524499 1264 ntBASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms