Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 AC138894.3-201ENST00000603787 634 ntBASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 KRT8P39-201ENST00000396270 1433 ntBASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 NKAPP1-205ENST00000585790 367 ntBASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 AC064862.7-201ENST00000604520 867 ntBASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 AP001269.4-201ENST00000609611 512 ntBASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHB16Q9NRJ7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 SBF1P1-201ENST00000444527 5631 ntBASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 AC097376.2-205ENST00000610159 5334 ntBASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 GGT3P-204ENST00000453783 1664 ntBASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 PCDHA3-202ENST00000532566 4594 ntBASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHB16Q9NRJ7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms