Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 AC140658.5-201ENST00000438532 169 ntBASIC17.23■□□□□ 0.35
CD248Q9HCU0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 AC112191.1-201ENST00000523689 701 ntBASIC17.23■□□□□ 0.35
CD248Q9HCU0 AC109322.1-201ENST00000524499 1264 ntBASIC17.23■□□□□ 0.35
CD248Q9HCU0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 AL365203.3-201ENST00000609742 2057 ntBASIC17.23■□□□□ 0.35
CD248Q9HCU0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.22■□□□□ 0.35
CD248Q9HCU0 RNF216P1-203ENST00000404404 2427 ntBASIC17.22■□□□□ 0.35
CD248Q9HCU0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD248Q9HCU0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD248Q9HCU0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD248Q9HCU0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD248Q9HCU0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CD248Q9HCU0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CD248Q9HCU0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD248Q9HCU0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CD248Q9HCU0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD248Q9HCU0 AL355306.1-201ENST00000415580 579 ntBASIC17.22■□□□□ 0.35
CD248Q9HCU0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.22■□□□□ 0.35
CD248Q9HCU0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CD248Q9HCU0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.22■□□□□ 0.35
CD248Q9HCU0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.22■□□□□ 0.35
CD248Q9HCU0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.22■□□□□ 0.35
CD248Q9HCU0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD248Q9HCU0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD248Q9HCU0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.22■□□□□ 0.35
CD248Q9HCU0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD248Q9HCU0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CD248Q9HCU0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD248Q9HCU0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD248Q9HCU0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 AC023141.5-201ENST00000458585 616 ntBASIC17.21■□□□□ 0.35
CD248Q9HCU0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 AL645728.2-201ENST00000641974 660 ntBASIC17.21■□□□□ 0.35
CD248Q9HCU0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD248Q9HCU0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CD248Q9HCU0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.21■□□□□ 0.34
CD248Q9HCU0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CD248Q9HCU0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CD248Q9HCU0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms