Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 PCDHB19P-201ENST00000570871 2371 ntBASIC14.32□□□□□ -0.12
CDH20Q9HBT6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 NORAD-201ENST00000565493 5339 ntBASIC14.31□□□□□ -0.12
CDH20Q9HBT6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CDH20Q9HBT6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 YBX1P5-201ENST00000509441 847 ntBASIC14.3□□□□□ -0.12
CDH20Q9HBT6 PRYP6-201ENST00000514804 343 ntBASIC14.3□□□□□ -0.12
CDH20Q9HBT6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 AC079781.4-201ENST00000641908 219 ntBASIC14.3□□□□□ -0.12
CDH20Q9HBT6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms