Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 PTCHD3P3-201ENST00000403073 906 ntBASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 AC021087.4-201ENST00000563761 564 ntBASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 LINC02447-202ENST00000501888 2146 ntBASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
THUMPD3Q9BV44 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 AL450487.1-201ENST00000426799 995 ntBASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 PMS2P1-201ENST00000431037 1228 ntBASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 AP001350.2-201ENST00000625104 1094 ntBASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 CDC14C-201ENST00000428251 1719 ntBASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 AC126177.1-201ENST00000547829 2218 ntBASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.67■□□□□ 0.1
THUMPD3Q9BV44 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.66■□□□□ 0.1
THUMPD3Q9BV44 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms