Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC10.87□□□□□ -0.67
LITAFQ99732 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC10.87□□□□□ -0.67
LITAFQ99732 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
LITAFQ99732 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC10.87□□□□□ -0.67
LITAFQ99732 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 AL020989.1-201ENST00000422979 469 ntBASIC10.87□□□□□ -0.67
LITAFQ99732 WDR53-204ENST00000433160 887 ntTSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC10.87□□□□□ -0.67
LITAFQ99732 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LITAFQ99732 GUSBP12-201ENST00000513727 720 ntBASIC10.87□□□□□ -0.67
LITAFQ99732 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC10.87□□□□□ -0.67
LITAFQ99732 NAPSB-206ENST00000562112 1266 ntBASIC10.87□□□□□ -0.67
LITAFQ99732 P4HB-223ENST00000576390 439 ntTSL 4 BASIC10.87□□□□□ -0.67
LITAFQ99732 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 AC011467.2-201ENST00000598425 242 ntBASIC10.87□□□□□ -0.67
LITAFQ99732 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 AC140479.7-201ENST00000636301 2332 ntBASIC10.87□□□□□ -0.67
LITAFQ99732 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 AC148477.4-201ENST00000613430 1793 ntBASIC10.87□□□□□ -0.67
LITAFQ99732 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.87□□□□□ -0.67
LITAFQ99732 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 AC131009.4-201ENST00000624048 1740 ntBASIC10.87□□□□□ -0.67
LITAFQ99732 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 C1R-201ENST00000535233 2211 ntTSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 AL590787.1-201ENST00000568856 1315 ntBASIC10.86□□□□□ -0.67
LITAFQ99732 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 AC011477.6-201ENST00000604980 1927 ntBASIC10.86□□□□□ -0.67
LITAFQ99732 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 AC005252.3-201ENST00000623855 2258 ntBASIC10.86□□□□□ -0.67
LITAFQ99732 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 AC126365.1-201ENST00000578585 1514 ntBASIC10.86□□□□□ -0.67
LITAFQ99732 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 CD70-202ENST00000423145 881 ntTSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 DANCR-204ENST00000444958 709 ntTSL 3 BASIC10.86□□□□□ -0.67
LITAFQ99732 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 AL359075.1-203ENST00000462729 1002 ntBASIC10.86□□□□□ -0.67
LITAFQ99732 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 AC009533.2-201ENST00000543664 586 ntBASIC10.86□□□□□ -0.67
LITAFQ99732 AL441883.1-201ENST00000566170 1045 ntBASIC10.86□□□□□ -0.67
LITAFQ99732 MIR4651-201ENST00000582622 73 ntBASIC10.86□□□□□ -0.67
LITAFQ99732 MIR4785-201ENST00000585005 73 ntBASIC10.86□□□□□ -0.67
LITAFQ99732 WDR6-223ENST00000627177 207 ntTSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC10.86□□□□□ -0.67
LITAFQ99732 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC10.86□□□□□ -0.67
LITAFQ99732 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LITAFQ99732 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms