Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 AL596087.1-201ENST00000400979 1969 ntBASIC15.48■□□□□ 0.07
COL21A1Q96P44 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 AL031432.2-201ENST00000566714 459 ntBASIC15.48■□□□□ 0.07
COL21A1Q96P44 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 AL928711.1-201ENST00000570165 459 ntBASIC15.48■□□□□ 0.07
COL21A1Q96P44 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 AL671883.3-201ENST00000603274 991 ntBASIC15.48■□□□□ 0.07
COL21A1Q96P44 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.48■□□□□ 0.07
COL21A1Q96P44 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 AC025580.3-201ENST00000617932 1424 ntBASIC15.48■□□□□ 0.07
COL21A1Q96P44 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 PMS2P7-201ENST00000506558 1336 ntBASIC15.47■□□□□ 0.07
COL21A1Q96P44 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 AC092384.3-202ENST00000564646 2873 ntBASIC15.47■□□□□ 0.07
COL21A1Q96P44 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 AC092850.2-201ENST00000623821 2697 ntBASIC15.47■□□□□ 0.07
COL21A1Q96P44 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.47■□□□□ 0.07
COL21A1Q96P44 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 KRT19P2-202ENST00000557173 1012 ntBASIC15.47■□□□□ 0.07
COL21A1Q96P44 AC040169.1-201ENST00000565382 521 ntBASIC15.47■□□□□ 0.07
COL21A1Q96P44 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL21A1Q96P44 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.47■□□□□ 0.07
COL21A1Q96P44 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL21A1Q96P44 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL21A1Q96P44 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL21A1Q96P44 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL21A1Q96P44 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms