Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 AP001282.1-201ENST00000531301 1499 ntBASIC16.61■□□□□ 0.25
RTP4Q96DX8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 AC022532.1-201ENST00000624563 1728 ntBASIC16.6■□□□□ 0.25
RTP4Q96DX8 AC126177.1-201ENST00000547829 2218 ntBASIC16.6■□□□□ 0.25
RTP4Q96DX8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 AL513190.1-201ENST00000621254 727 ntBASIC16.6■□□□□ 0.25
RTP4Q96DX8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTP4Q96DX8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RTP4Q96DX8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 MCCD1P2-201ENST00000423228 335 ntBASIC16.59■□□□□ 0.25
RTP4Q96DX8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RTP4Q96DX8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTP4Q96DX8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTP4Q96DX8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTP4Q96DX8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTP4Q96DX8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
RTP4Q96DX8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTP4Q96DX8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTP4Q96DX8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTP4Q96DX8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTP4Q96DX8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTP4Q96DX8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RTP4Q96DX8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RTP4Q96DX8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
RTP4Q96DX8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RTP4Q96DX8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RTP4Q96DX8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RTP4Q96DX8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RTP4Q96DX8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms