Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 AL139400.1-201ENST00000366220 510 ntBASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 AC069335.1-201ENST00000489972 472 ntBASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 AC093028.1-201ENST00000622998 982 ntBASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3KBP1Q96B97 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SH3KBP1Q96B97 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SH3KBP1Q96B97 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SH3KBP1Q96B97 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 SPCS2P4-201ENST00000436160 681 ntBASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 KRT18P34-201ENST00000488218 1270 ntBASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 AC067863.1-201ENST00000494933 530 ntBASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 AC008267.7-201ENST00000624570 1194 ntBASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SH3KBP1Q96B97 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 AL671710.1-201ENST00000610245 2349 ntBASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 AL596257.1-201ENST00000641463 2694 ntBASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms