Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 HAUS4P1-201ENST00000406739 1145 ntBASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 AC004945.1-201ENST00000416738 983 ntBASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 AC093525.9-201ENST00000624961 1746 ntBASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 LINC02012-201ENST00000608206 1725 ntBASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 KRT8P44-201ENST00000441609 1350 ntBASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 ACTBP11-201ENST00000436287 1126 ntBASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 MYCLP2-201ENST00000449268 967 ntBASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 BNIP3P42-201ENST00000454982 569 ntBASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 BNIP3P29-201ENST00000598302 571 ntBASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 AC011447.5-201ENST00000616168 564 ntBASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 AL109936.8-201ENST00000641772 604 ntBASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 AC092053.1-201ENST00000605787 1936 ntBASIC18.61■□□□□ 0.57
U2AF1L4Q8WU68 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 LINC00895-201ENST00000629028 1637 ntBASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 AC092933.1-201ENST00000393644 945 ntBASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 BCYRN1-201ENST00000418539 200 ntBASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 AC044860.1-202ENST00000559481 777 ntBASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 MPDU1-223ENST00000582151 728 ntBASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 CTBP2P3-201ENST00000585629 1255 ntBASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 TMEM261P1-201ENST00000604899 340 ntBASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.6■□□□□ 0.57
U2AF1L4Q8WU68 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms