Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 AC148477.5-201ENST00000625164 1645 ntBASIC14.17□□□□□ -0.14
BEST4Q8NFU0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 AL671277.2-201ENST00000458060 996 ntBASIC14.17□□□□□ -0.14
BEST4Q8NFU0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 KRT8P26-201ENST00000534154 1276 ntBASIC14.17□□□□□ -0.14
BEST4Q8NFU0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 AC012306.2-201ENST00000609350 630 ntBASIC14.17□□□□□ -0.14
BEST4Q8NFU0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 AC097493.4-201ENST00000641197 219 ntBASIC14.17□□□□□ -0.14
BEST4Q8NFU0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 TP73-AS1-210ENST00000637775 1455 ntBASIC14.17□□□□□ -0.14
BEST4Q8NFU0 PMPCAP1-201ENST00000508114 1576 ntBASIC14.17□□□□□ -0.14
BEST4Q8NFU0 AC007686.3-201ENST00000619017 3487 ntBASIC14.17□□□□□ -0.14
BEST4Q8NFU0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BEST4Q8NFU0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 SBF1P1-201ENST00000444527 5631 ntBASIC14.16□□□□□ -0.14
BEST4Q8NFU0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 GGT3P-204ENST00000453783 1664 ntBASIC14.16□□□□□ -0.14
BEST4Q8NFU0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 AC097637.2-201ENST00000624096 1997 ntBASIC14.16□□□□□ -0.14
BEST4Q8NFU0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.16□□□□□ -0.14
BEST4Q8NFU0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms