Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRFBP1Q8NEF9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.61■□□□□ 0.09
SRFBP1Q8NEF9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRFBP1Q8NEF9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SRFBP1Q8NEF9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 ELL2P1-201ENST00000413990 1906 ntBASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 KRT8P23-201ENST00000560090 1207 ntBASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRFBP1Q8NEF9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 AC079328.2-201ENST00000561241 3354 ntBASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 ADH5P3-201ENST00000433842 1137 ntBASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 IGHV3-62-201ENST00000520057 340 ntBASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms