Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.83■□□□□ 0.28
PAF1Q8N7H5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.83■□□□□ 0.28
PAF1Q8N7H5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.83■□□□□ 0.28
PAF1Q8N7H5 GPALPP1-207ENST00000611650 899 ntBASIC16.83■□□□□ 0.28
PAF1Q8N7H5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.83■□□□□ 0.28
PAF1Q8N7H5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAF1Q8N7H5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PAF1Q8N7H5 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PAF1Q8N7H5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.83■□□□□ 0.28
PAF1Q8N7H5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.83■□□□□ 0.28
PAF1Q8N7H5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 AL671277.1-201ENST00000429656 993 ntBASIC16.82■□□□□ 0.28
PAF1Q8N7H5 SPDYE11-202ENST00000450699 704 ntBASIC16.82■□□□□ 0.28
PAF1Q8N7H5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 SPDYE9P-201ENST00000570642 692 ntBASIC16.82■□□□□ 0.28
PAF1Q8N7H5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 AL596442.2-201ENST00000610240 980 ntBASIC16.82■□□□□ 0.28
PAF1Q8N7H5 SPDYE10P-202ENST00000612005 668 ntBASIC16.82■□□□□ 0.28
PAF1Q8N7H5 SPDYE8P-202ENST00000612377 668 ntBASIC16.82■□□□□ 0.28
PAF1Q8N7H5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 ELL2P1-201ENST00000413990 1906 ntBASIC16.82■□□□□ 0.28
PAF1Q8N7H5 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAF1Q8N7H5 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 KRT8P39-201ENST00000396270 1433 ntBASIC16.81■□□□□ 0.28
PAF1Q8N7H5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 AC004967.1-201ENST00000453589 447 ntBASIC16.81■□□□□ 0.28
PAF1Q8N7H5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 FAM86C2P-203ENST00000528684 1004 ntBASIC16.81■□□□□ 0.28
PAF1Q8N7H5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.81■□□□□ 0.28
PAF1Q8N7H5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms