Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 TEX28P1-201ENST00000613479 1221 ntBASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 TEX28P2-201ENST00000617764 1221 ntBASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 EEF1DP4-201ENST00000446006 880 ntBASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 AL139010.1-201ENST00000454878 894 ntBASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 AC026979.3-201ENST00000607315 403 ntBASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 AL662844.4-201ENST00000606367 2838 ntBASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 AL691432.1-201ENST00000596308 1422 ntBASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 CYP4F24P-201ENST00000586049 1580 ntBASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARHGEF39Q8N4T4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 MTND6P24-201ENST00000440466 518 ntBASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms