Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 POM121L3P-201ENST00000419331 1163 ntBASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 PRYP5-201ENST00000451909 266 ntBASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 CLEC4GP1-201ENST00000596555 870 ntBASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 PGM5P2-202ENST00000637225 1043 ntBASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 AC023157.3-201ENST00000619086 2088 ntBASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 PRAL-201ENST00000624952 3286 ntBASIC16.36■□□□□ 0.21
TRIM42Q8IWZ5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 PCDHA3-202ENST00000532566 4594 ntBASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 ABCD1P5-201ENST00000445663 754 ntBASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 TOB2P1-201ENST00000469761 992 ntBASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 AP000867.3-201ENST00000524675 377 ntBASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 OR2I1P-209ENST00000641730 5365 ntBASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM42Q8IWZ5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRIM42Q8IWZ5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRIM42Q8IWZ5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms