Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 AGAP7P-201ENST00000582299 2062 ntBASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 AGAP14-201ENST00000624701 2060 ntBASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 SPDYE15P-201ENST00000424157 909 ntBASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 SNORA78-201ENST00000459373 127 ntBASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 AC005332.3-201ENST00000589904 676 ntBASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD2Q8IV50 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 FGD5P1-202ENST00000614866 2498 ntBASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 AL441883.1-201ENST00000566170 1045 ntBASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms