Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 AC243562.2-201ENST00000561247 970 ntBASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 MIR4259-201ENST00000584466 101 ntBASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 AC010319.3-201ENST00000597028 470 ntBASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 KRT43P-201ENST00000434019 910 ntBASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 AL158212.4-201ENST00000624062 1286 ntBASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 AP001094.4-201ENST00000579008 2176 ntBASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 LETM1P2-201ENST00000597330 2178 ntBASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS4Q8IUM7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 FZD10-202ENST00000539839 3282 ntBASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 AZGP1P1-201ENST00000411909 902 ntBASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 AL442647.2-201ENST00000429864 857 ntBASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 RPL13P2-201ENST00000440687 659 ntBASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 SNX29P1-201ENST00000548357 1007 ntBASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 BTNL10-201ENST00000595971 695 ntBASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 MIR6775-201ENST00000617557 69 ntBASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NPAS4Q8IUM7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 KRT8P37-201ENST00000451609 1420 ntBASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS4Q8IUM7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms