Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 REXO1L8P-201ENST00000604378 1897 ntBASIC16.39■□□□□ 0.22
CRLF3Q8IUI8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CRLF3Q8IUI8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.39■□□□□ 0.22
CRLF3Q8IUI8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CRLF3Q8IUI8 TOP3BP1-201ENST00000420768 1380 ntBASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 PRAL-201ENST00000624952 3286 ntBASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 CDC14C-201ENST00000428251 1719 ntBASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 LINC02447-202ENST00000501888 2146 ntBASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 KRT8P39-201ENST00000396270 1433 ntBASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 AL031284.1-201ENST00000419297 478 ntBASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 RNPS1P1-201ENST00000507437 918 ntBASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 RNA5SP419-201ENST00000515908 135 ntBASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CRLF3Q8IUI8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 AC112504.1-201ENST00000623415 1841 ntBASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 AL022342.1-201ENST00000400363 863 ntBASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 AC018712.1-201ENST00000455767 687 ntBASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 SART3-203ENST00000546611 1184 ntBASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 MIR600HG-201ENST00000449175 5984 ntBASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CRLF3Q8IUI8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 LINC01144-201ENST00000626198 1710 ntBASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CRLF3Q8IUI8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms