Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 AC104794.3-201ENST00000566840 1248 ntBASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 SPDYE18-201ENST00000510091 1050 ntBASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
UBE3BQ7Z3V4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 PIN1P1-201ENST00000412108 996 ntBASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 GNAQP1-201ENST00000444815 1067 ntBASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE3BQ7Z3V4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 BTBD7P1-201ENST00000447253 1453 ntBASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 HIST3H2BA-201ENST00000436555 524 ntBASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 SPDYE22P-201ENST00000582158 798 ntBASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms